BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008H05SP1|AL425940
(793 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1450 1572 0.0
>3x_Contig1450
Length = 9648
Score = 1572 bits (793), Expect = 0.0
Identities = 793/793 (100%)
Strand = Plus / Plus
Query: 1 gatctaagctcttcttgtttgctgacctccctgcctccaattcttcttctagagtgatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2622 gatctaagctcttcttgtttgctgacctccctgcctccaattcttcttctagagtgatat 2681
Query: 61 tcagacgcatccagtaatttagcagagtcatcatcataattcaaaataaaatcacgtaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2682 tcagacgcatccagtaatttagcagagtcatcatcataattcaaaataaaatcacgtaga 2741
Query: 121 ggtttgatagtgaaaaagaattgaagtagtgagtttaggtagcatgtatttcccacatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2742 ggtttgatagtgaaaaagaattgaagtagtgagtttaggtagcatgtatttcccacatta 2801
Query: 181 ttgattccagctggccatgtagcaacaggaagacaacttacgtccacaataccggtgtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2802 ttgattccagctggccatgtagcaacaggaagacaacttacgtccacaataccggtgtct 2861
Query: 241 aaaaagtggttgataagtttactatttctagtaaaaccaatattctgaagggccattttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2862 aaaaagtggttgataagtttactatttctagtaaaaccaatattctgaagggccattttc 2921
Query: 301 aacttcaatagataatcaggacctgtcataattccgtgactccatttcttttgaaaaact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2922 aacttcaatagataatcaggacctgtcataattccgtgactccatttcttttgaaaaact 2981
Query: 361 tcaaggatgacatcgtcgcttgcattcatgtcaatttcaatgatgttcaatgcttcatcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2982 tcaaggatgacatcgtcgcttgcattcatgtcaatttcaatgatgttcaatgcttcatcg 3041
Query: 421 tatgatatgtcagtgcagttgtaatattgcgcaaattctggacattcatctgtcaagaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3042 tatgatatgtcagtgcagttgtaatattgcgcaaattctggacattcatctgtcaagaca 3101
Query: 481 ttcaaaagaaatattgagcgcctatctagtgctattgtaaaaatcgcccgatcataatct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3102 ttcaaaagaaatattgagcgcctatctagtgctattgtaaaaatcgcccgatcataatct 3161
Query: 541 tttttcaaaccaggggcatcagcaatattgatcgtatatgcagtttggataatatcatca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3162 tttttcaaaccaggggcatcagcaatattgatcgtatatgcagtttggataatatcatca 3221
Query: 601 tctactgtctcgtctacctttaaaagagtgtaagcttgttgtacattataatatggttca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3222 tctactgtctcgtctacctttaaaagagtgtaagcttgttgtacattataatatggttca 3281
Query: 661 tactccaccaaaaacaacatcttttgactacctaaatattttcctagcacacgtagggca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3282 tactccaccaaaaacaacatcttttgactacctaaatattttcctagcacacgtagggca 3341
Query: 721 tttcttagatcttttctttgattatcagagctccttaatagatgagaattgtaatattca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3342 tttcttagatcttttctttgattatcagagctccttaatagatgagaattgtaatattca 3401
Query: 781 atcatcgtattgg 793
|||||||||||||
Sbjct: 3402 atcatcgtattgg 3414
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7392
Number of Sequences: 1807
Number of extensions: 7392
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 793
length of database: 10,358,551
effective HSP length: 16
effective length of query: 777
effective length of database: 10,329,639
effective search space: 8026129503
effective search space used: 8026129503
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)